euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

191 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip23 chr1 9141337 9141337 + unknown germline . no 237 SLC2A5
srip76 chr1 17229436 17229436 . unknown germline . no 237 .
srip468 chr1 42483959 42483959 + unknown germline . no 237 HIVEP3
srip604 chr1 46453454 46453454 . unknown germline . no 237 MAST2
srip1161 chr1 62390939 62390939 . unknown germline . no 237 INADL
srip1823 chr1 75192898 75192898 - unknown germline . no 237 CRYZ
srip2033 chr1 81855995 81855995 + unknown germline . no 237 .
srip2801 chr1 101978984 101978984 - unknown germline . no 237 .
srip3192 chr1 105028221 105028221 + unknown germline . no 237 .
srip4135 chr1 149308428 149308428 + unknown germline . no 237 LOC645262
srip4743 chr1 165553141 165553141 - unknown germline . no 237 .
srip5432 chr1 179575369 179575369 - unknown germline . no 237 TDRD5
srip5999 chr1 192262261 192262261 - unknown germline . no 237 .
srip7220 chr1 237449858 237449858 . unknown germline . no 237 RYR2
srip7225 chr1 238131321 238131321 . unknown germline . no 237 .
srip7684 chr10 9525639 9525639 + unknown germline . no 237 .
srip7766 chr10 16031588 16031588 + unknown germline . no 237 .
srip7829 chr10 19065791 19065791 - unknown germline . no 237 .
srip7845 chr10 19211098 19211098 - unknown germline . no 237 .
srip8032 chr10 20011538 20011538 + unknown germline . no 237 C10orf112
srip8470 chr10 25707693 25707693 - unknown germline . no 237 GPR158
srip9543 chr10 68803693 68803693 + unknown germline . no 237 LRRTM3;CTNNA3
srip9811 chr10 82972200 82972200 . unknown germline . no 237 .
srip10541 chr10 91717631 91717631 - unknown germline . no 237 .
srip10696 chr10 101104378 101104378 - unknown germline . no 237 CNNM1
srip10812 chr10 107785206 107785206 . unknown germline . no 237 .
srip12248 chr11 7285038 7285038 - unknown germline . no 237 SYT9
srip12548 chr11 15380252 15380252 + unknown germline . no 237 .
srip13821 chr11 33670130 33670130 + unknown germline . no 237 C11orf41
srip14856 chr11 48861400 48861400 . unknown germline . no 237 .
srip15388 chr11 58171843 58171843 + unknown germline . no 237 .
srip17185 chr11 94684368 94684368 + unknown germline . no 237 .
srip17354 chr11 98848035 98848035 + unknown germline . no 237 .
srip18235 chr11 112084613 112084613 + unknown germline . no 237 BCO2
srip18337 chr11 121131527 121131527 - unknown germline . no 237 .
srip19284 chr11 134305645 134305645 - unknown germline . no 237 .
srip19607 chr12 8105605 8105605 + unknown germline . no 237 .
srip19902 chr12 11219195 11219195 - unknown germline . no 237 PRH1-PRR4
srip20144 chr12 12933687 12933687 - unknown germline . no 237 APOLD1
srip20748 chr12 28226420 28226420 - unknown germline . no 237 .
srip21169 chr12 34017331 34017331 - unknown germline . no 237 .
srip22199 chr12 43256979 43256979 - unknown germline . no 237 .
srip22853 chr12 49106380 49106380 . unknown germline . no 237 CCNT1
srip22857 chr12 49532032 49532032 + unknown germline . no 237 .
srip22973 chr12 57607150 57607150 + unknown germline . no 237 .
srip22977 chr12 58583122 58583122 + unknown germline . no 237 .
srip24628 chr12 84965140 84965140 + unknown germline . no 237 .
srip26903 chr13 22489798 22489798 + unknown germline . no 237 .
srip27370 chr13 27488117 27488117 + unknown germline . no 237 .
srip27996 chr13 42771396 42771396 + unknown germline . no 237 DGKH
srip29081 chr13 61462340 61462340 - unknown germline . no 237 .
srip29669 chr13 62577311 62577311 . unknown germline . no 237 .
srip29747 chr13 64569846 64569846 - unknown germline . no 237 .
srip30986 chr13 79259790 79259790 - unknown germline . no 237 .
srip31556 chr13 85871605 85871605 - unknown germline . no 237 .
srip32404 chr13 91626228 91626228 + unknown germline . no 237 .
srip33526 chr13 104296230 104296230 - unknown germline . no 237 .
srip35228 chr14 28301256 28301256 + unknown germline . no 237 .
srip36307 chr14 39875089 39875089 + unknown germline . no 237 FBXO33
srip37042 chr14 49123540 49123540 + unknown germline . no 237 .
srip38145 chr14 71197796 71197796 + unknown germline . no 237 MAP3K9
srip38640 chr14 86381803 86381803 - unknown germline . no 237 .
srip40243 chr15 47507335 47507335 - unknown germline . no 237 SEMA6D
srip42249 chr15 74168564 74168564 . unknown germline . no 237 TBC1D21
srip42255 chr15 77910870 77910870 - unknown germline . no 237 LINGO1
srip42515 chr15 83551624 83551624 - unknown germline . no 237 HOMER2
srip42611 chr15 85140902 85140902 + unknown germline . no 237 .
srip43254 chr15 100931152 100931152 - unknown germline . no 237 .
srip45221 chr16 33958529 33958529 . unknown germline . no 237 .
srip45508 chr16 33992437 33992437 . unknown germline . no 237 .
srip45905 chr16 63480377 63480377 + unknown germline . no 237 .
srip46334 chr16 71028016 71028016 + unknown germline . no 237 HYDIN
srip46404 chr16 76865783 76865783 - unknown germline . no 237 .
srip50734 chr18 51762737 51762737 - unknown germline . no 237 .
srip51616 chr18 74515281 74515281 - unknown germline . no 237 LOC100131655
srip51845 chr18 74960069 74960069 . unknown germline . no 237 .
srip52314 chr19 27868594 27868594 + unknown germline . no 237 .
srip52756 chr2 6798283 6798283 - unknown germline . no 237 .
srip52782 chr2 7050600 7050600 + unknown germline . no 237 .
srip53473 chr2 23191008 23191008 - unknown germline . no 237 .
srip54268 chr2 36570259 36570259 - unknown germline . no 237 .
srip58243 chr2 141852915 141852915 - unknown germline . no 237 LRP1B
srip59206 chr2 147020925 147020925 + unknown germline . no 237 .
srip59258 chr2 150489660 150489660 . unknown germline . no 237 .
srip59767 chr2 168735521 168735521 - unknown germline . no 237 .
srip60162 chr2 178676252 178676252 - unknown germline . no 237 PDE11A
srip60788 chr2 191478707 191478707 - unknown germline . no 237 .
srip62640 chr2 235519803 235519803 + unknown germline . no 237 .
srip62669 chr2 238252204 238252204 . unknown germline . no 237 COL6A3
srip63455 chr20 16479499 16479499 - unknown germline . no 237 KIF16B
srip64040 chr20 25895497 25895497 - unknown germline . no 237 .
srip64059 chr20 25903871 25903871 - unknown germline . no 237 .
srip64760 chr20 41952104 41952104 - unknown germline . no 237 .
srip65331 chr20 60132824 60132824 - unknown germline . no 237 CDH4
srip65548 chr21 14390190 14390190 - unknown germline . no 237 .
srip65604 chr21 17134455 17134455 + unknown germline . no 237 USP25
srip66296 chr21 23626198 23626198 . unknown germline . no 237 .
srip66921 chr21 29069178 29069178 + unknown germline . no 237 .
srip67127 chr21 39196253 39196253 . unknown germline . no 237 KCNJ6
srip67498 chr22 22486374 22486374 - unknown germline . no 237 IGL@
srip67838 chr22 22715593 22715593 + unknown germline . no 237 IGL@
srip67881 chr22 26216030 26216030 . unknown germline . no 237 MYO18B
srip68761 chr22 44324597 44324597 - unknown germline . no 237 PNPLA3
srip71083 chr3 26524455 26524455 - unknown germline . no 237 .
srip71907 chr3 38626071 38626071 + unknown germline . no 237 SCN5A
srip72720 chr3 55788574 55788574 + unknown germline . no 237 ERC2
srip73371 chr3 59852895 59852895 + unknown germline . no 237 FHIT
srip74440 chr3 80590166 80590166 - unknown germline . no 237 .
srip75587 chr3 85576556 85576556 + unknown germline . no 237 CADM2
srip78285 chr3 144610077 144610077 - unknown germline . no 237 .
srip79870 chr3 169269958 169269958 + unknown germline . no 237 MECOM
srip80423 chr3 176091337 176091337 + unknown germline . no 237 .
srip80860 chr3 181192836 181192836 + unknown germline . no 237 .
srip81174 chr3 185025806 185025806 - unknown germline . no 237 MAP3K13
srip81473 chr3 186372129 186372129 + unknown germline . no 237 .
srip82112 chr3 193354172 193354172 - unknown germline . no 237 OPA1
srip82360 chr4 9451067 9451067 . unknown germline . no 237 DEFB131
srip82985 chr4 18162684 18162684 - unknown germline . no 237 .
srip84698 chr4 47007787 47007787 - unknown germline . no 237 .
srip86176 chr4 66413931 66413931 + unknown germline . no 237 EPHA5
srip87343 chr4 80768532 80768532 + unknown germline . no 237 GDEP
srip88897 chr4 103343749 103343749 + unknown germline . no 237 .
srip90335 chr4 115132699 115132699 + unknown germline . no 237 .
srip91592 chr4 132181654 132181654 - unknown germline . no 237 .
srip92204 chr4 134596423 134596423 + unknown germline . no 237 .
srip92807 chr4 138177329 138177329 + unknown germline . no 237 .
srip92864 chr4 138413561 138413561 - unknown germline . no 237 .
srip93882 chr4 158907280 158907280 - unknown germline . no 237 .
srip96076 chr5 8749521 8749521 + unknown germline . no 237 .
srip96118 chr5 9970852 9970852 . unknown germline . no 237 .
srip96148 chr5 10430417 10430417 - unknown germline . no 237 MARCH6
srip96287 chr5 11391269 11391269 + unknown germline . no 237 CTNND2
srip96780 chr5 16883026 16883026 - unknown germline . no 237 MYO10
srip96892 chr5 21207723 21207723 + unknown germline . no 237 .
srip97744 chr5 33633341 33633341 - unknown germline . no 237 ADAMTS12
srip98059 chr5 33797550 33797550 - unknown germline . no 237 ADAMTS12
srip99178 chr5 63433963 63433963 + unknown germline . no 237 .
srip99515 chr5 68263468 68263468 - unknown germline . no 237 .
srip100129 chr5 87319030 87319030 + unknown germline . no 237 .
srip100728 chr5 89450775 89450775 + unknown germline . no 237 .
srip101086 chr5 96866415 96866415 + unknown germline . no 237 .
srip102995 chr5 124712434 124712434 + unknown germline . no 237 .
srip103357 chr5 125040043 125040043 + unknown germline . no 237 .
srip103778 chr5 137014781 137014781 - unknown germline . no 237 KLHL3
srip104211 chr5 144331003 144331003 - unknown germline . no 237 .
srip105251 chr5 155619871 155619871 + unknown germline . no 237 .
srip105818 chr5 164495152 164495152 - unknown germline . no 237 LOC100507193
srip107070 chr6 13191024 13191024 + unknown germline . no 237 PHACTR1
srip107503 chr6 13503042 13503042 + unknown germline . no 237 .
srip107938 chr6 32457274 32457274 + unknown germline . no 237 .
srip108006 chr6 32509105 32509105 - unknown germline . no 237 .
srip108066 chr6 32589560 32589560 + unknown germline . no 237 .
srip109531 chr6 63368201 63368201 + unknown germline . no 237 .
srip111276 chr6 78749399 78749399 + unknown germline . no 237 .
srip112049 chr6 91669514 91669514 - unknown germline . no 237 .
srip112684 chr6 102283762 102283762 - unknown germline . no 237 GRIK2
srip115685 chr6 162181262 162181262 + unknown germline . no 237 PARK2
srip116034 chr7 2407477 2407477 . unknown germline . no 237 EIF3B
srip116204 chr7 10500040 10500040 . unknown germline . no 237 .
srip117466 chr7 52789459 52789459 + unknown germline . no 237 .
srip119427 chr7 84320294 84320294 . unknown germline . no 237 .
srip119677 chr7 84901723 84901723 - unknown germline . no 237 .
srip120992 chr7 97374628 97374628 + unknown germline . no 237 .
srip121754 chr7 107829256 107829256 + unknown germline . no 237 NRCAM
srip122021 chr7 108325670 108325670 + unknown germline . no 237 .
srip123114 chr7 132306006 132306006 . unknown germline . no 237 PLXNA4
srip123131 chr7 135015346 135015346 . unknown germline . no 237 .
srip124076 chr8 4452901 4452901 - unknown germline . no 237 CSMD1
srip125446 chr8 24926547 24926547 - unknown germline . no 237 .
srip127004 chr8 71768921 71768921 + unknown germline . no 237 .
srip127457 chr8 72399228 72399228 - unknown germline . no 237 .
srip128284 chr8 87315042 87315042 + unknown germline . no 237 .
srip129136 chr8 115788572 115788572 - unknown germline . no 237 .
srip130282 chr8 134724460 134724460 . unknown germline . no 237 .
srip133400 chr9 32463891 32463891 - unknown germline . no 237 DDX58
srip133615 chr9 34904794 34904794 - unknown germline . no 237 .
srip134215 chr9 82082786 82082786 - unknown germline . no 237 .
srip134616 chr9 99186850 99186850 . unknown germline . no 237 .
srip134620 chr9 99490029 99490029 - unknown germline . no 237 .
srip134703 chr9 100675542 100675542 - unknown germline . no 237 C9orf156
srip135878 chr9 118083873 118083873 - unknown germline . no 237 DEC1
srip136758 chrX 23277237 23277237 . unknown germline . no 237 .
srip137244 chrX 54917144 54917144 + unknown germline . no 237 .
srip137347 chrX 55264659 55264659 - unknown germline . no 237 .
srip137564 chrX 55585152 55585152 - unknown germline . no 237 .
srip137796 chrX 61799456 61799456 . unknown germline . no 237 .
srip138604 chrX 74928698 74928698 - unknown germline . no 237 .
srip140084 chrX 102363181 102363181 + unknown germline . no 237 .
srip140466 chrX 111557754 111557754 - unknown germline . no 237 ZCCHC16
srip140527 chrX 116025284 116025284 + unknown germline . no 237 .
srip142284 chrY 13490336 13490336 . unknown germline . no 237 .